CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.C00664
(
Eucalyptus grandis
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
Eucgr.C00664
T243098_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.C00664.1
HSF
43
133
FLTKTFEIVEDPATDPIVSWSEGRNSFIVWDAHQFAATLLPKHFKHGNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRHLLKTIKRRR
Eucgr.C00664.1
HSF
182
224
SRDHIFAMEQRIQRTERKQQQMLAFLAKACNNPSFIRQLMQRN
Eucgr.C00664.2
HSF
9
55
HPEKKLFLRFDSNFDGFRKVDPDRWEFANEGFLGGQRHLLKTIKRRR
Eucgr.C00664.2
HSF
103
146
QSRDHIFAMEQRIQRTERKQQQMLAFLAKACNNPSFIRQLMQRN
Links
Other
HSF
family TFs
Other
Eucalyptus grandis
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10008617m.g
Citrus clementina
Ciclev10008617m.g
I
0.348
orange1.1g016091m.g
Citrus sinensis
orange1.1g016091m.g
I
0.348
PK02473.1
Cannabis sativa
PK02473.1
I
0.347
PRUPE_ppa007300mg
Prunus persica
PRUPE_ppa007300mg
I
0.345
Pm005519
Prunus mume
Pm005519
I
0.345
Eucgr.C03056
Eucalyptus grandis
Eucgr.C03056
I
0.344
gene02705-v1.0-hybrid
Fragaria vesca
gene02705-v1.0-hybrid
I
0.344
POPTR_0006s24330
Populus trichocarpa
POPTR_0006s24330
I
0.342
29739.m003565
Ricinus communis
29739.m003565
I
0.342
Aquca_001_00047
Aquilegia coerulea
Aquca_001_00047
I
0.340
TCM_037308
Theobroma cacao
TCM_037308
I
0.339
MDP0000243895
Malus domestica
MDP0000243895
I
0.339
Lus10013797.g
Linum usitatissimum
Lus10013797.g
I
0.338
Lus10039134.g
Linum usitatissimum
Lus10039134.g
I
0.338
AMTR_s00036p00115830
Amborella trichopoda
AMTR_s00036p00115830
I
0.335
GLYMA13G16510
Glycine max
GLYMA13G16510
I
0.335
29912.m005397
Ricinus communis
29912.m005397
I
0.335
evm.TU.supercontig_7.163
Carica papaya
evm.TU.supercontig_7.163
I
0.335
Lus10011941.g
Linum usitatissimum
Lus10011941.g
I
0.335
Lus10027627.g
Linum usitatissimum
Lus10027627.g
I
0.335
Ca_03183
Cicer arietinum
Ca_03183
I
0.334
chr4.CM0297.80.nd
Lotus japonicus
chr4.CM0297.80.nd
I
0.334
Cucsa.117100
Cucumis sativus
Cucsa.117100
I
0.333
TCM_037635
Theobroma cacao
TCM_037635
I
0.332
ATHSFA2
Vitis vinifera
VIT_04s0008g01110
I
0.332
Cla017103
Citrullus lanatus
Cla017103
I
0.332
SapurV1A.0086s0550
Salix purpurea
SapurV1A.0086s0550
I
0.332
Thhalv10002333m.g
Eutrema salsugineum
Thhalv10002333m.g
I
0.332
HSFA2
Arabidopsis thaliana
AT2G26150
I
0.331
ATHSFA2
Arabidopsis lyrata
fgenesh2_kg.4__531__AT2G26150.1
I
0.331
PGSC0003DMG400008223
Solanum tuberosum
PGSC0003DMG400008223
I
0.331
cassava46878.m1
Manihot esculenta
cassava46878.m1
N
0.331
Bostr.26326s0040
Boechera stricta
Bostr.26326s0040
I
0.331
Cagra.7662s0001
Capsella grandiflora
Cagra.7662s0001
I
0.331
Carubv10025710m.g
Capsella rubella
Carubv10025710m.g
I
0.331
Gorai.001G012700
Gossypium raimondii
Gorai.001G012700
I
0.331
cassava7697.valid.m1
Manihot esculenta
cassava7697.valid.m1
I
0.330
Eucgr.C00873
Eucalyptus grandis
Eucgr.C00873
I
0.330
evm.TU.supercontig_28.162
Carica papaya
evm.TU.supercontig_28.162
I
0.330
VIT_11s0016g02010
Vitis vinifera
VIT_11s0016g02010
I
0.328
Cla023029
Citrullus lanatus
Cla023029
I
0.328
cassava28692.m1
Manihot esculenta
cassava28692.m1
I
0.328
Cucsa.395060
Cucumis sativus
Cucsa.395060
I
0.328
SapurV1A.0108s0230
Salix purpurea
SapurV1A.0108s0230
I
0.328
cassava721.valid.m1
Manihot esculenta
cassava721.valid.m1
I
0.326
Aquca_020_00446
Aquilegia coerulea
Aquca_020_00446
I
0.326
Bo3g042080
Brassica oleracea
Bo3g042080
I
0.325
Bra000557
Brassica rapa
Bra000557
I
0.325
LPERR07G04400
Leersia perrieri
LPERR07G04400
I
0.325
GLYMA17G06160
Glycine max
GLYMA17G06160
I
0.324
GSMUA_Achr6G00960_001
Musa acuminata
GSMUA_Achr6G00960_001
I
0.323
Bostr.26833s0872
Boechera stricta
Bostr.26833s0872
I
0.323
Carubv10028638m.g
Capsella rubella
Carubv10028638m.g
I
0.323
MDP0000489886
Malus domestica
MDP0000489886
I
0.323
POPTR_0006s15050
Populus trichocarpa
POPTR_0006s15050
I
0.322
Cagra.4622s0012
Capsella grandiflora
Cagra.4622s0012
I
0.322
Gorai.013G220400
Gossypium raimondii
Gorai.013G220400
I
0.322
chr1.CM0133.110.nc
Lotus japonicus
chr1.CM0133.110.nc
I
0.322
GSMUA_Achr5G03000_001
Musa acuminata
GSMUA_Achr5G03000_001
I
0.320
TRIUR3_02308
Triticum urartu
TRIUR3_02308
I
0.320
GRMZM2G125969
Zea mays
GRMZM2G125969
I
0.319
Si030256m.g
Setaria italica
Si030256m.g
I
0.319
Eucgr.C03433
Eucalyptus grandis
Eucgr.C03433
I
0.319
Pavir.J18081
Panicum virgatum
Pavir.J18081
I
0.319
MLOC_75519
Hordeum vulgare
MLOC_75519
I
0.318