CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000109700
(
Globodera pallida
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
GPLIN_000109700
T243671_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hsf-1
M00682_2.00
Caenorhabditis elegans
TTCYAGAA
TTCTRGAA
PBM
Narasimhan et al.(2015)
pTH10796
0.480
0.635
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000109700
HSF
73
176
FLIKLWNIVEDPSHWEVIRWDESGMSFHIMKPYVFCSDILPFYFKHKNLNSLVRQLNMYGFRKNTPIERSGLARAESDQDHLEFFHSFFRRDHPEMLINIHRKV
Links
Other
HSF
family TFs
Other
Globodera pallida
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000673800
Globodera pallida
GPLIN_000673800
I
0.716
BXY_0882000
Bursaphelenchus xylophilus
BXY_0882000
I
0.601
ALUE_0000801801
Ascaris lumbricoides
ALUE_0000801801
I
0.597
ASU_10106
Ascaris suum
ASU_10106
I
0.597
TCNE_0000949901
Toxocara canis
TCNE_0000949901
I
0.597
EVEC_0000124901
Enterobius vermicularis
EVEC_0000124901
I
0.585
MhA1_Contig1076.frz3.gene4
Meloidogyne hapla
MhA1_Contig1076.frz3.gene4
I
0.577
Minc16435
Meloidogyne incognita
Minc16435
I
0.570
SMUV_0000043201
Syphacia muris
SMUV_0000043201
I
0.568
ASIM_0001223701
Anisakis simplex
ASIM_0001223701
I
0.561
DICVIV_08378
Dictyocaulus viviparus
DICVIV_08378
I
0.551
HCOI00423400
Haemonchus contortus
HCOI00423400
I
0.542
HCOI00424600
Haemonchus contortus
HCOI00424600
I
0.542
ACOC_0000071501
Angiostrongylus costaricensis
ACOC_0000071501
I
0.541
ANCCAN_00795
Ancylostoma caninum
ANCCAN_00795
I
0.541
ANCCEY_01944
Ancylostoma ceylanicum
ANCCEY_01944
I
0.541
SVUK_0000175201
Strongylus vulgaris
SVUK_0000175201
I
0.541
LOAG_08901
Loa loa
LOAG_08901
I
0.535
nLs.2.1.2.g08921
Litomosoides sigmodontis
nLs.2.1.2.g08921
I
0.533
WBGene00238233
Onchocerca volvulus
WBGene00238233
I
0.523
NBR_0001979501
Nippostrongylus brasiliensis
NBR_0001979501
I
0.523
nDi.2.2.2.g05157
Dirofilaria immitis
nDi.2.2.2.g05157
I
0.523
nOo.2.0.1.g06259
Onchocerca ochengi
nOo.2.0.1.g06259
I
0.523
Bm6746
Brugia malayi
Bm6746
I
0.522
BTMF_0001609701
Brugia timori
BTMF_0001609701
I
0.522
EEL_0000787901
Elaeophora elaphi
EEL_0000787901
I
0.522
nAv.1.0.1.g08619
Acanthocheilonema viteae
nAv.1.0.1.g08619
I
0.522
TCLT_0000441901
Thelazia callipaeda
TCLT_0000441901
I
0.512
CBN21581
Caenorhabditis brenneri
CBN21581
I
0.496
CRE28338
Caenorhabditis remanei
CRE28338
I
0.495
snap_masked-nMf.1.1.scaf11979-processed-gene-0.4
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf11979-processed-gene-0.4
I
0.495
hsf-1
Caenorhabditis elegans
WBGene00002004
D
0.480
DME_0000290701
Dracunculus medinensis
DME_0000290701
I
0.458
SPAL_0000387400
Strongyloides papillosus
SPAL_0000387400
I
0.455
SVE_1155700
Strongyloides venezuelensis
SVE_1155700
I
0.449
SSTP_0000347800
Strongyloides stercoralis
SSTP_0000347800
I
0.429
PTRK_0001079800
Parastrongyloides trichosuri
PTRK_0001079800
I
0.419
GPUH_0001175501
Gongylonema pulchrum
GPUH_0001175501
I
0.403
nRc.2.0.1.g30983
Romanomermis culicivorax
nRc.2.0.1.g30983
I
0.395
SPAL_0001635100
Strongyloides papillosus
SPAL_0001635100
I
0.381
SVE_0431600
Strongyloides venezuelensis
SVE_0431600
I
0.378
PTRK_0000997100
Parastrongyloides trichosuri
PTRK_0000997100
I
0.377
SPAL_0000387600
Strongyloides papillosus
SPAL_0000387600
I
0.375
SVE_1156000
Strongyloides venezuelensis
SVE_1156000
I
0.373
nRc.2.0.1.g38503
Romanomermis culicivorax
nRc.2.0.1.g38503
I
0.372
SSTP_0000347500
Strongyloides stercoralis
SSTP_0000347500
N
0.364
L898_g5106
Steinernema monticolum
L898_g5106
I
0.362
L596_g17815
Steinernema carpocapsae
L596_g17815
I
0.354
L892_g820
Steinernema scapterisci
L892_g820
I
0.354
SSTP_0000175600
Strongyloides stercoralis
SSTP_0000175600
I
0.353
L893_g7030
Steinernema glaseri
L893_g7030
I
0.351
RSKR_0000052100
Rhabditophanes kr3021
RSKR_0000052100
I
0.345
L889_g598
Steinernema feltiae
L889_g598
I
0.342
CapteG130381
Capitella teleta
CapteG130381
I
0.338
L898_g35624
Steinernema monticolum
L898_g35624
I
0.334
Alligator_sinensis_CCG021829.1
Alligator sinensis
Alligator_sinensis_CCG021829.1
I
0.332
CGI_10007406
Crassostrea gigas
CGI_10007406
I
0.324
O9G_004185
Rozella allomycis
O9G_004185
I
0.324
L804_02322
Cryptococcus gattii
L804_02322
I
0.323
T265_09239
Opisthorchis viverrini
T265_09239
I
0.323
TC001736
Tribolium castaneum
TC001736
I
0.321
SBAD_0001111901
Soboliphyme baturini
SBAD_0001111901
N
0.321
HYDPIDRAFT_32921
Hydnomerulius pinastri
HYDPIDRAFT_32921
I
0.319
K443DRAFT_105640
Laccaria amethystina
K443DRAFT_105640
I
0.319
K443DRAFT_89912
Laccaria amethystina
K443DRAFT_89912
I
0.319
LACBIDRAFT_147701
Laccaria bicolor
LACBIDRAFT_147701
I
0.319
YQE_02436
Dendroctonus ponderosae
YQE_02436
I
0.318