CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA016336
(
Oryza indica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
BGIOSGA016336
T244935_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA016336-PA
LOB
41
99
GSEEIRQELPVQQQGDTVSSLVYEANDRMRDPVYDCVRAISFLQNQVSQLQMQLAIGQG
Links
Other
LOB
family TFs
Other
Oryza indica
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART04G11480
Oryza barthii
OBART04G11480
N
0.981
ONIVA04G09470
Oryza nivara
ONIVA04G09470
N
0.981
ORGLA04G0085000
Oryza glaberrima
ORGLA04G0085000
N
0.968
OGLUM04G11190
Oryza glumaepatula
OGLUM04G11190
N
0.958
OBART02G29970
Oryza barthii
OBART02G29970
N
0.808
GRMZM2G044150
Zea mays
GRMZM2G044150
I
0.763
Sb09g016240
Sorghum bicolor
Sb09g016240
I
0.763
Si024229m.g
Setaria italica
Si024229m.g
I
0.763
mgf018189m
Mimulus guttatus
mgf018189m
I
0.746
ORGLA02G0255200
Oryza glaberrima
ORGLA02G0255200
N
0.737
PK17019.1
Cannabis sativa
PK17019.1
I
0.735
LjSGA_062507.1.1
Lotus japonicus
LjSGA_062507.1.1
I
0.724
PK09808.1
Cannabis sativa
PK09808.1
I
0.714
MDP0000265429
Malus domestica
MDP0000265429
I
0.712
Sb05g000550
Sorghum bicolor
Sb05g000550
I
0.709