cassava4159.m1 (Manihot esculenta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 cassava4159.m1 T246480_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava4159.m1 LOB 1 52

Links

Other LOB family TFs
Other Manihot esculenta TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.769
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.769
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.769
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.750
TCM_043081 Theobroma cacao TCM_043081 I 0.750
cassava40961.m1 Manihot esculenta cassava40961.m1 I 0.750
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I 0.750
MDP0000318244 Malus domestica MDP0000318244 I 0.731
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I 0.731
cassava11218.m1 Manihot esculenta cassava11218.m1 I 0.731
GLYMA10G35760 Glycine max GLYMA10G35760 I 0.731
MDP0000218986 Malus domestica MDP0000218986 I 0.731
Lus10036130.g Linum usitatissimum Lus10036130.g I 0.731
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.731
Lus10011645.g Linum usitatissimum Lus10011645.g I 0.731
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I 0.731
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.731
Ca_04287 Cicer arietinum Ca_04287 I 0.731
GLYMA15G05030 Glycine max GLYMA15G05030 I 0.731
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I 0.731
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I 0.731
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I 0.731
MTR_1g095850 Medicago truncatula MTR_1g095850 I 0.731
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I 0.731
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I 0.731
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I 0.731
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N 0.712
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I 0.712
MDP0000879799 Malus domestica MDP0000879799 N 0.712
Pm018585 Prunus mume Pm018585 I 0.712
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N 0.712
MTR_4g060950 Medicago truncatula MTR_4g060950 I 0.712
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.712
GLYMA11G15810 Glycine max GLYMA11G15810 N 0.712
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I 0.712
Pm000938 Prunus mume Pm000938 I 0.712
Carubv10010390m.g Capsella rubella Carubv10010390m.g N 0.712
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N 0.712
mgf015666m Mimulus guttatus mgf015666m N 0.712
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N 0.712