CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_50.154
(
Carica papaya
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
evm.TU.supercontig_50.154
T246893_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_50.154
LOB
1
42
MDSLNFEAQCRIEDPVYGCVGIISLLQKQIQKAETQLAKMQA
Links
Other
LOB
family TFs
Other
Carica papaya
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g065910
Brassica oleracea
Bo3g065910
I
0.738
Bostr.0556s0333
Boechera stricta
Bostr.0556s0333
I
0.738
Thhalv10005497m.g
Eutrema salsugineum
Thhalv10005497m.g
I
0.738
Thhalv10015971m.g
Eutrema salsugineum
Thhalv10015971m.g
I
0.738
Bo7g083780
Brassica oleracea
Bo7g083780
I
0.714
Gorai.008G280400
Gossypium raimondii
Gorai.008G280400
N
0.714