CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb00324
(
Panicum virgatum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Pavir.Bb00324
T247185_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb00324.1.p
LOB
18
119
PCAACRTLRRRCVPGCVFAPFFPAEGDEPSRFAAVHRVFGASNAARMLEDVERPEERRRAAETLVEEALARVRDPALDCLSYVAVLQMLNEKTREQVDAARA
Links
Other
LOB
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ba02246
Panicum virgatum
Pavir.Ba02246
N
0.899
Si032865m.g
Setaria italica
Si032865m.g
N
0.838
evm.TU.supercontig_331.6
Carica papaya
evm.TU.supercontig_331.6
I
0.702