CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr2.CM0225.220.nd
(
Lotus japonicus
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
chr2.CM0225.220.nd
T247411_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr2.CM0225.220.nd
LOB
35
133
ACAACKYQRRRCAKDCALSPYFPADKPKMFSNAHRLFGVSNIIRILKQVEPDERDEAMKSIIYESDIRAKYPQQGCYGVILQYQALIYKAMEELRYVQM
Links
Other
LOB
family TFs
Other
Lotus japonicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr5G15570_001
Musa acuminata
GSMUA_Achr5G15570_001
N
0.714