naif1 (Tetraodon nigroviridis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 ENSTNIG00000002538 T248421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
naif1
M02281_2.00 		Xenopus tropicalis
NNNCGYANN
NNTRCGNNN		 PBM
Weirauch et al.(2014)
pTH8560 		0.857 0.500
naif1.S
M02282_2.00 		Xenopus laevis
NNDRCGTAN
NTACGYHNN		 PBM
Weirauch et al.(2014)
pTH9299 		0.857 0.474
NAIF1_CHICK
M01260_2.00 		Gallus gallus
NNNDRCGTAN
NTACGYHNNN		 PBM
Lambert et al.(2019)
pTH9808 		0.848 0.434
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000005089 MADF 21 104

Links

Other MADF family TFs
Other Tetraodon nigroviridis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
naif1 Takifugu rubripes ENSTRUG00000013589 I 0.943
ENSGMOG00000008831 Gadus morhua ENSGMOG00000008831 I 0.935
naif1 Gasterosteus aculeatus ENSGACG00000018458 I 0.932
naif1 Oryzias latipes ENSORLG00000018283 I 0.932
ENSLOCG00000006120 Lepisosteus oculatus ENSLOCG00000006120 I 0.930
ENSONIG00000012590 Oreochromis niloticus ENSONIG00000012590 I 0.915
ENSLACG00000016334 Latimeria chalumnae ENSLACG00000016334 I 0.911
ENSAMXG00000012133 Astyanax mexicanus ENSAMXG00000012133 I 0.894
ENSPFOG00000005824 Poecilia formosa ENSPFOG00000005824 I 0.880
ENSXMAG00000013359 Xiphophorus maculatus ENSXMAG00000013359 I 0.880
ENSMEUG00000000224 Macropus eugenii ENSMEUG00000000224 I 0.859
NAIF1 Monodelphis domestica ENSMODG00000005695 I 0.859
naif1 Xenopus tropicalis XB-GENE-986890 D 0.857
naif1.S Xenopus laevis XB-GENE-986896 D 0.857
ENSFALG00000001298 Ficedula albicollis ENSFALG00000001298 I 0.848
NAIF1 Gallus gallus ENSGALG00000027734 I 0.848
NAIF1 Meleagris gallopavo ENSMGAG00000003576 I 0.848
NAIF1 Taeniopygia guttata ENSTGUG00000003526 I 0.848
NAIF1_CHICK Gallus gallus NAIF1_CHICK D 0.848
Aan_R009291 Calypte anna Aan_R009291 I 0.848
Afo_R001565 Aptenodytes forsteri Afo_R001565 I 0.848
naif1 Danio rerio ENSDARG00000062753 I 0.843
Brh_R009924 Buceros rhinoceros Brh_R009924 I 0.839
ENSPSIG00000007027 Pelodiscus sinensis ENSPSIG00000007027 I 0.833