CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GJ20543
(
Drosophila virilis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
FBgn0207683
T248929_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hng1
M03913_2.00
Drosophila melanogaster
VTWACGTWAB
VTWACGTWAB
SELEX
Nitta et al.(2015)
CG9437_1
0.956
0.815
hng1
M06397_2.00
Drosophila melanogaster
ACGTAA
TTACGT
B1H
Zhu et al.(2011)
CG9437_SANGER_5_FBgn0034599
0.956
0.815
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0234960
MADF
15
95
LIHTIRSTPSLYDHRHGDFRLSQRKEEDWAKVAETLNISSPDARRRWTCLRDRYSRELKQMRLHPNSEFGHNDFFRQMDFL
Links
Other
MADF
family TFs
Other
Drosophila virilis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GH20726
Drosophila grimshawi
FBgn0128189
I
0.968
GI20810
Drosophila mojavensis
FBgn0143545
I
0.968
GA21787
Drosophila pseudoobscura
FBgn0081772
I
0.960
GL10159
Drosophila persimilis
FBgn0147769
I
0.960
hng1
Drosophila melanogaster
FBgn0034599
D
0.956
GM15812
Drosophila sechellia
FBgn0170728
I
0.956
GD11570
Drosophila simulans
FBgn0183311
I
0.956
GE12175
Drosophila yakuba
FBgn0229940
I
0.956
GG22095
Drosophila erecta
FBgn0114270
I
0.950
GF11939
Drosophila ananassae
FBgn0088978
I
0.947
GK19657
Drosophila willistoni
FBgn0221655
I
0.942