CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_11s0016g04130
(
Vitis vinifera
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
VIT_11s0016g04130
T249999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_11s0016g04130.t01
MADF
142
217
AWGERFVQLGRKSLRSDDWADVAEKVSEGSKIERTDMQCRNRLDTLKKKYKKERAKVEEMGGGNSKWVFYKKMDAL
Links
Other
MADF
family TFs
Other
Vitis vinifera
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc12g043090.1
Solanum lycopersicum
Solyc12g043090.1
N
0.913
POPTR_0001s18000
Populus trichocarpa
POPTR_0001s18000
N
0.858
SapurV1A.1168s0060
Salix purpurea
SapurV1A.1168s0060
N
0.855
SapurV1A.3798s0010
Salix purpurea
SapurV1A.3798s0010
N
0.855
Eucgr.J02994
Eucalyptus grandis
Eucgr.J02994
N
0.854
VIT_09s0002g04700
Vitis vinifera
VIT_09s0002g04700
N
0.827
PRUPE_ppa009556mg
Prunus persica
PRUPE_ppa009556mg
N
0.823
Pm013502
Prunus mume
Pm013502
N
0.823
MDP0000276691
Malus domestica
MDP0000276691
N
0.822
PGSC0003DMG400031382
Solanum tuberosum
PGSC0003DMG400031382
N
0.820
Cla015679
Citrullus lanatus
Cla015679
N
0.814
Cucsa.358990
Cucumis sativus
Cucsa.358990
N
0.814