orange1.1g009421m.g (Citrus sinensis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 orange1.1g009421m.g T250793_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g009421m MADF 33 112
orange1.1g009421m MADF 263 324
orange1.1g010312m MADF 33 112
orange1.1g010312m MADF 241 302
orange1.1g010503m MADF 33 113
orange1.1g010503m MADF 237 298
orange1.1g020821m MADF 33 99
orange1.1g020821m MADF 241 302

Links

Other MADF family TFs
Other Citrus sinensis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10019662m.g Citrus clementina Ciclev10019662m.g N 0.971
Cla015352 Citrullus lanatus Cla015352 N 0.907
VIT_07s0005g00970 Vitis vinifera VIT_07s0005g00970 N 0.896
GLYMA19G40141 Glycine max GLYMA19G40141 N 0.894
Lus10013421.g Linum usitatissimum Lus10013421.g N 0.893
cassava26969.m1 Manihot esculenta cassava26969.m1 N 0.893
Bra018563 Brassica rapa Bra018563 N 0.879
Bo2g100340 Brassica oleracea Bo2g100340 N 0.878
GLYMA03G37521 Glycine max GLYMA03G37521 N 0.863
TCM_004738 Theobroma cacao TCM_004738 N 0.860
Bostr.16335s0035 Boechera stricta Bostr.16335s0035 N 0.859