CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J15698
(
Panicum virgatum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Pavir.J15698
T250827_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J15698.1.p
MADF
39
116
AYDERWTALGRGQLKAQQWEELAADVAARCAATPGVAVHRKTGTQCRHKLEKLRKRYRTEAARPVTSLWTFFRRMDQL
Links
Other
MADF
family TFs
Other
Panicum virgatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si014062m.g
Setaria italica
Si014062m.g
N
0.961
GRMZM2G379179
Zea mays
GRMZM2G379179
N
0.921
GRMZM5G850092
Zea mays
GRMZM5G850092
N
0.905
Sb07g029070
Sorghum bicolor
Sb07g029070
N
0.896
LPERR08G15410
Leersia perrieri
LPERR08G15410
N
0.894
BRADI3G38680
Brachypodium distachyon
BRADI3G38680
N
0.882
GSMUA_Achr6G04170_001
Musa acuminata
GSMUA_Achr6G04170_001
N
0.868
Aquca_010_00154
Aquilegia coerulea
Aquca_010_00154
N
0.861
Traes_5BL_81FD6E89B
Triticum aestivum
Traes_5BL_81FD6E89B
N
0.860
MLOC_51079
Hordeum vulgare
MLOC_51079
N
0.855