CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf16122-augustus-gene-0.4
(
Meloidogyne floridensis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
maker-nMf.1.1.scaf16122-augustus-gene-0.4
T252285_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf16122-augustus-gene-0.4-mRNA-1
MADF
11
92
FIEIVREHEFLWRKGHEDHKDKSKCESTWARIANETGLEDGKAAKQKWKNLSDYYGRVKKPKPSGSDAKEMKWSYLKAMSFL
Links
Other
MADF
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc11473
Meloidogyne incognita
Minc11473
N
0.956
Minc18439
Meloidogyne incognita
Minc18439
N
0.931
snap_masked-nMf.1.1.scaf10287-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf10287-processed-gene-0.2
N
0.854