CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001082401
(
Nippostrongylus brasiliensis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
NBR_0001082401
T252340_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001082401-mRNA-1
MADF
3
83
LIEAVKHSRCLYDSTDRQYRSTEYKIKVWNRLVHVLQFDGDSRTLYARWKQLRDKYGKEKRKVKYQGDQSTWQYFKHLSFL
NBR_0001082401-mRNA-1
MADF
117
202
LIEEVRAHPCLFDIRDPKYRHSECRNQAWNSVIAHLNYPGDVNSIYKQWKKLRDRYVREKRRLRMQRDNGVHDDSTWDLYPAMAWI
Links
Other
MADF
family TFs
Other
Nippostrongylus brasiliensis
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00547400
Haemonchus contortus
HCOI00547400
N
0.970
HPBE_0001937401
Heligmosomoides bakeri
HPBE_0001937401
N
0.970
HPLM_0000813601
Haemonchus placei
HPLM_0000813601
N
0.970
ANCCAN_12036
Ancylostoma caninum
ANCCAN_12036
N
0.969
ANCCEY_05568
Ancylostoma ceylanicum
ANCCEY_05568
N
0.969
ACOC_0000207501
Angiostrongylus costaricensis
ACOC_0000207501
N
0.968
DICVIV_05986
Dictyocaulus viviparus
DICVIV_05986
N
0.968
NECAME_10287
Necator americanus
NECAME_10287
N
0.964
L596_g13814
Steinernema carpocapsae
L596_g13814
N
0.929
L892_g8213
Steinernema scapterisci
L892_g8213
N
0.929
WBGene00248256
Onchocerca volvulus
WBGene00248256
N
0.911
nOo.2.0.1.g01489
Onchocerca ochengi
nOo.2.0.1.g01489
N
0.911
TCLT_0000789301
Thelazia callipaeda
TCLT_0000789301
N
0.909
WUBG_08209
Wuchereria bancrofti
WUBG_08209
N
0.907
Bm4662
Brugia malayi
Bm4662
N
0.907
CBG03666
Caenorhabditis briggsae
CBG03666
N
0.907
LOAG_01771
Loa loa
LOAG_01771
N
0.907
EEL_0000409901
Elaeophora elaphi
EEL_0000409901
N
0.907
nAv.1.0.1.g09008
Acanthocheilonema viteae
nAv.1.0.1.g09008
N
0.907
nDi.2.2.2.g08480
Dirofilaria immitis
nDi.2.2.2.g08480
N
0.907
nLs.2.1.2.g00834
Litomosoides sigmodontis
nLs.2.1.2.g00834
N
0.907
L898_g2485
Steinernema monticolum
L898_g2485
N
0.906
ALUE_0000346601
Ascaris lumbricoides
ALUE_0000346601
N
0.900
ASU_05114
Ascaris suum
ASU_05114
N
0.900
L893_g25983
Steinernema glaseri
L893_g25983
N
0.893
DME_0000085501
Dracunculus medinensis
DME_0000085501
N
0.890
CBN12315
Caenorhabditis brenneri
CBN12315
N
0.889
CBN13279
Caenorhabditis brenneri
CBN13279
N
0.889
EVEC_0000129701
Enterobius vermicularis
EVEC_0000129701
N
0.889
GPLIN_001081400
Globodera pallida
GPLIN_001081400
N
0.889
madf-3
Caenorhabditis elegans
WBGene00019218
N
0.888
SMUV_0001029601
Syphacia muris
SMUV_0001029601
N
0.888
CJA06746
Caenorhabditis japonica
CJA06746
N
0.887
CRE25006
Caenorhabditis remanei
CRE25006
N
0.885
BTMF_0001501001
Brugia timori
BTMF_0001501001
N
0.884
maker-nMf.1.1.scaf00985-augustus-gene-0.14
Meloidogyne floridensis
maker-nMf.1.1.scaf00985-augustus-gene-0.14
N
0.871
SVUK_0000707801
Strongylus vulgaris
SVUK_0000707801
N
0.828