CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_10107
(
Verticillium albo atrum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
VDBG_10107
T252729_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_10107T0
MADS box
8
48
KDFRKGFENRKTGIFKKSDTFYGYYKAKVAVLVIARHATTP
Links
Other
MADS box
family TFs
Other
Verticillium albo atrum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_05198
Verticillium dahliae
VDAG_05198
N
1.000
VDBG_10107
Verticillium alfalfae
VDBG_10107
N
1.000
VDBG_10174
Verticillium albo atrum
VDBG_10174
N
0.825
VDAG_05235
Verticillium dahliae
VDAG_05235
N
0.825
VDBG_10174
Verticillium alfalfae
VDBG_10174
N
0.825
VDBG_09006
Verticillium albo atrum
VDBG_09006
N
0.800
VDAG_05148
Verticillium dahliae
VDAG_05148
N
0.800
VDAG_05209
Verticillium dahliae
VDAG_05209
N
0.800
VDBG_09006
Verticillium alfalfae
VDBG_09006
N
0.800