Bo3g060720 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo3g060720 T253093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.896 0.896
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g060720.1 MADS box 10 57

Links

Other MADS box family TFs
Other Brassica oleracea TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra001209 Brassica rapa Bra001209 I 0.979
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.896
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.896
AGL91 Arabidopsis thaliana AT3G66656 D 0.896
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.875
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.875
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.875
Bo4g182590 Brassica oleracea Bo4g182590 I 0.812
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.812
Bra021910 Brassica rapa Bra021910 I 0.812
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.792
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.792
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.792
AGL29 Arabidopsis thaliana AT2G34440 I 0.792
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.792
Ca_24185 Cicer arietinum Ca_24185 I 0.750
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.729
Ca_05023 Cicer arietinum Ca_05023 I 0.729
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.729
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.708
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.708