CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra009436
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra009436
T253255_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra009436.1-P
MADS box
13
64
KIERKESKSVAFSKRRKGLFSKTAQLCVLSGAQVAILATPPCSKSNVSFYSF
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g178940
Brassica oleracea
Bo9g178940
N
0.979
Carubv10028105m.g
Capsella rubella
Carubv10028105m.g
N
0.729
Thhalv10015623m.g
Eutrema salsugineum
Thhalv10015623m.g
N
0.729
Bo8g011140
Brassica oleracea
Bo8g011140
N
0.708
Bra014217
Brassica rapa
Bra014217
N
0.708
Thhalv10023175m.g
Eutrema salsugineum
Thhalv10023175m.g
N
0.708