CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra020552
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra020552
T253304_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra020552.1-P
MADS box
10
57
PMTNSTARNQTFRKRKTGLLKKANELSTLCGVKVCVVINSCDNTETEF
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g156350
Brassica oleracea
Bo2g156350
N
0.875
Bo2g155830
Brassica oleracea
Bo2g155830
N
0.854
Bra020524
Brassica rapa
Bra020524
N
0.828
Bo2g155860
Brassica oleracea
Bo2g155860
N
0.771
Bra020550
Brassica rapa
Bra020550
N
0.771
Bo20805s010
Brassica oleracea
Bo20805s010
N
0.759