BRADI1G32210 (Brachypodium distachyon)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 BRADI1G32210 T253387_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FBP24_PETHY
M10997_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP24_01 		0.729 0.729
AGL15
M06992_2.00 		Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN
NTTTCYWHWTTDGGWAANW		 Dap-seq
OMalley et al.(2016)
AGL15_col_a 		0.708 0.708
AGL15
M06993_2.00 		Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH
DDNTTTCYHHWTTDGGWAANH		 Dap-seq
OMalley et al.(2016)
AGL15_colamp_a 		0.708 0.708
AGL15
M10927_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_01 		0.708 0.708
AGL15
M10928_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_02 		0.708 0.708
Q7X9I6_MALDO
M11023_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS12_02 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G32210.1 MADS box 10 57

Links

Other MADS box family TFs
Other Brachypodium distachyon TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR06G20000 Leersia perrieri LPERR06G20000 I 0.771
POPTR_0001s29100 Populus trichocarpa POPTR_0001s29100 I 0.771
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.750
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I 0.750
F775_11207 Aegilops tauschii F775_11207 I 0.750
Pavir.J10823 Panicum virgatum Pavir.J10823 I 0.750
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.750
evm.TU.supercontig_125.55 Carica papaya evm.TU.supercontig_125.55 I 0.729
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.729
Lus10028214.g Linum usitatissimum Lus10028214.g I 0.729
Sb10g026690 Sorghum bicolor Sb10g026690 I 0.729
Si007187m.g Setaria italica Si007187m.g I 0.729
Solyc12g088080.1 Solanum lycopersicum Solyc12g088080.1 I 0.729
Carubv10002596m.g Capsella rubella Carubv10002596m.g I 0.729
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.729
cassava39185.m1 Manihot esculenta cassava39185.m1 I 0.729
cassava4651.m1 Manihot esculenta cassava4651.m1 I 0.729
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.729
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.729
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.729
FBP24_PETHY Petunia x hybrida FBP24_PETHY D 0.729
Cagra.5588s0006 Capsella grandiflora Cagra.5588s0006 I 0.729
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.729
Lus10042918.g Linum usitatissimum Lus10042918.g I 0.729
ANR1 Arabidopsis thaliana AT2G14210 I 0.729
Bra008802 Brassica rapa Bra008802 I 0.729
GSMUA_Achr7G12610_001 Musa acuminata GSMUA_Achr7G12610_001 I 0.729
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I 0.729
MTR_2g009890 Medicago truncatula MTR_2g009890 I 0.729
Bra006214 Brassica rapa Bra006214 I 0.729
Bo3g009340 Brassica oleracea Bo3g009340 I 0.729
OB11G21480 Oryza brachyantha OB11G21480 I 0.714
SapurV1A.1370s0060 Salix purpurea SapurV1A.1370s0060 I 0.708
SapurV1A.0333s0300 Salix purpurea SapurV1A.0333s0300 I 0.708
Eucgr.F02161 Eucalyptus grandis Eucgr.F02161 I 0.708
SapurV1A.2345s0030 Salix purpurea SapurV1A.2345s0030 I 0.708
PK08595.1 Cannabis sativa PK08595.1 I 0.708
Bostr.2902s0113 Boechera stricta Bostr.2902s0113 I 0.708
Q7X9I6_MALDO Malus domestica Q7X9I6_MALDO D 0.708
SapurV1A.4660s0010 Salix purpurea SapurV1A.4660s0010 I 0.708
Thhalv10026116m.g Eutrema salsugineum Thhalv10026116m.g I 0.708
MDP0000475549 Malus domestica MDP0000475549 I 0.708
Lus10005081.g Linum usitatissimum Lus10005081.g I 0.708
Gorai.010G032700 Gossypium raimondii Gorai.010G032700 I 0.708
Lus10034370.g Linum usitatissimum Lus10034370.g I 0.708
chr6.CM0055.180.nc Lotus japonicus chr6.CM0055.180.nc I 0.708
Cucsa.331900 Cucumis sativus Cucsa.331900 I 0.708
Gorai.009G227500 Gossypium raimondii Gorai.009G227500 I 0.708
Gorai.008G018100 Gossypium raimondii Gorai.008G018100 I 0.708
evm.TU.supercontig_177.14 Carica papaya evm.TU.supercontig_177.14 I 0.708
MDP0000132738 Malus domestica MDP0000132738 I 0.708
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I 0.708
MDP0000234911 Malus domestica MDP0000234911 I 0.708
Pavir.Db00414 Panicum virgatum Pavir.Db00414 I 0.708
Cla023427 Citrullus lanatus Cla023427 I 0.708
GLYMA13G32810 Glycine max GLYMA13G32810 I 0.708
GLYMA08G07001 Glycine max GLYMA08G07001 I 0.708
GLYMA06G10020 Glycine max GLYMA06G10020 I 0.708
GLYMA14G36221 Glycine max GLYMA14G36221 I 0.708
GLYMA15G06470 Glycine max GLYMA15G06470 I 0.708
OPUNC06G21840 Oryza punctata OPUNC06G21840 I 0.708
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.708
GLYMA04G10015 Glycine max GLYMA04G10015 I 0.708
GLYMA02G38091 Glycine max GLYMA02G38091 I 0.708
Bo2g161560 Brassica oleracea Bo2g161560 I 0.708
AGL15 Arabidopsis thaliana AT5G13790 D 0.708
Bo7g116760 Brassica oleracea Bo7g116760 I 0.708
Bo9g166450 Brassica oleracea Bo9g166450 I 0.708
AGL15 Arabidopsis lyrata fgenesh2_kg.6__1336__AT5G13790.1 I 0.708
Bra017638 Brassica rapa Bra017638 I 0.708
POPTR_0005s19440 Populus trichocarpa POPTR_0005s19440 I 0.708
POPTR_0017s13400 Populus trichocarpa POPTR_0017s13400 I 0.708
Pm015397 Prunus mume Pm015397 I 0.708
Pm004349 Prunus mume Pm004349 I 0.708
Cla010047 Citrullus lanatus Cla010047 I 0.708
29596.m000699 Ricinus communis 29596.m000699 I 0.708
29804.m001536 Ricinus communis 29804.m001536 I 0.708
cassava39138.m1 Manihot esculenta cassava39138.m1 I 0.708
cassava33801.m1 Manihot esculenta cassava33801.m1 I 0.708
Ca_14956 Cicer arietinum Ca_14956 I 0.708
TCM_034549 Theobroma cacao TCM_034549 I 0.708
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.708
PRUPE_ppa010249mg Prunus persica PRUPE_ppa010249mg I 0.708
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I 0.708
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.708
Solyc11g005120.1 Solanum lycopersicum Solyc11g005120.1 I 0.708
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I 0.708
Cucsa.331840 Cucumis sativus Cucsa.331840 I 0.708