CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G099408
(
Zea mays
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GRMZM2G099408
T254288_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G099408_P01
MADS box
10
57
WISNNATRRATYKRRTQGLEKKASELATLCGIKLCVVVYGEGEAQPKV
Links
Other
MADS box
family TFs
Other
Zea mays
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb05g023886
Sorghum bicolor
Sb05g023886
N
0.956
Sb05g023895
Sorghum bicolor
Sb05g023895
N
0.956
Sb05g023915
Sorghum bicolor
Sb05g023915
N
0.844
Sb05g023917
Sorghum bicolor
Sb05g023917
N
0.822
Sb05g023912
Sorghum bicolor
Sb05g023912
N
0.711