CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_3g466900
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_3g466900
T254764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH34467
MADS box
1
28
MVDELTTLCGIDVCAILYSEFHSEPEVW
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_3g466890
Medicago truncatula
MTR_3g466890
N
0.926
MTR_3g466830
Medicago truncatula
MTR_3g466830
N
0.852
VIT_14s0060g00300
Vitis vinifera
VIT_14s0060g00300
I
0.741
MTR_3g466930
Medicago truncatula
MTR_3g466930
N
0.704
POPTR_0005s00420
Populus trichocarpa
POPTR_0005s00420
I
0.704
POPTR_0013s00350
Populus trichocarpa
POPTR_0013s00350
I
0.704
gene22916-v1.0-hybrid
Fragaria vesca
gene22916-v1.0-hybrid
I
0.704
gene22967-v1.0-hybrid
Fragaria vesca
gene22967-v1.0-hybrid
I
0.704