CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC01G06920
(
Oryza punctata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OPUNC01G06920
T255285_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G06920.1
MADS box
12
59
YVNDERERDITFFKRRNGLFKGASDLSILTGASVAVVIEDQNRSKFHS
Links
Other
MADS box
family TFs
Other
Oryza punctata
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA002989
Oryza indica
BGIOSGA002989
N
0.936
OB01G17220
Oryza brachyantha
OB01G17220
N
0.936
OBART01G07200
Oryza barthii
OBART01G07200
N
0.936
OGLUM01G08130
Oryza glumaepatula
OGLUM01G08130
N
0.936
OLONG_003085
Oryza longistaminata
OLONG_003085
N
0.936
OMERI01G07120
Oryza meridionalis
OMERI01G07120
N
0.936
ONIVA01G09240
Oryza nivara
ONIVA01G09240
N
0.936
ORUFI01G07750
Oryza rufipogon
ORUFI01G07750
N
0.936
OS01G0213300
Oryza sativa
OS01G0213300
N
0.936
LPERR01G06800
Leersia perrieri
LPERR01G06800
N
0.723