CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI08G04840
(
Oryza rufipogon
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ORUFI08G04840
T255476_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI08G04840.1
MADS box
15
59
QQQSPSSSTFERLHGKLVREAGELAASCGADVTVLAVPPARSSSF
Links
Other
MADS box
family TFs
Other
Oryza rufipogon
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA08G0038000
Oryza glaberrima
ORGLA08G0038000
N
0.956
ONIVA08G04210
Oryza nivara
ONIVA08G04210
N
0.956
OGLUM08G04610
Oryza glumaepatula
OGLUM08G04610
N
0.956
BGIOSGA027573
Oryza indica
BGIOSGA027573
N
0.933
OBART08G04360
Oryza barthii
OBART08G04360
N
0.860
OMERI08G04440
Oryza meridionalis
OMERI08G04440
N
0.844