CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400022465
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400022465
T255634_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400057855
MADS box
12
58
KIIKETSRMVTFSKRRKGLFKKAKEFESMTGSRVASIVLSPTGRPYT
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc01g098050.1
Solanum lycopersicum
Solyc01g098050.1
N
0.979
PGSC0003DMG400022460
Solanum tuberosum
PGSC0003DMG400022460
N
0.872
PGSC0003DMG400022464
Solanum tuberosum
PGSC0003DMG400022464
N
0.723
PGSC0003DMG400046651
Solanum tuberosum
PGSC0003DMG400046651
N
0.723
Solyc01g098070.1
Solanum lycopersicum
Solyc01g098070.1
N
0.702
Solyc03g062820.1
Solanum lycopersicum
Solyc03g062820.1
N
0.702