CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400024902
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400024902
T255642_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400064083
MADS box
14
61
QSNKKTNNPKSYQVRKECIKRKSMELATLCDIKVCTVITGPNGQLQTW
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400033092
Solanum tuberosum
PGSC0003DMG400033092
N
0.958
PGSC0003DMG400026582
Solanum tuberosum
PGSC0003DMG400026582
N
0.938
PGSC0003DMG400026881
Solanum tuberosum
PGSC0003DMG400026881
N
0.917
Solyc01g103870.1
Solanum lycopersicum
Solyc01g103870.1
N
0.913
PGSC0003DMG400016838
Solanum tuberosum
PGSC0003DMG400016838
N
0.896
PGSC0003DMG400039282
Solanum tuberosum
PGSC0003DMG400039282
N
0.880
PGSC0003DMG400035438
Solanum tuberosum
PGSC0003DMG400035438
N
0.880
Solyc06g071300.1
Solanum lycopersicum
Solyc06g071300.1
N
0.875
PGSC0003DMG400016835
Solanum tuberosum
PGSC0003DMG400016835
N
0.875
PGSC0003DMG400036234
Solanum tuberosum
PGSC0003DMG400036234
N
0.854