Si007683m.g (Setaria italica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Si007683m.g T256203_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ATE7_PETHY
M11010_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP22_01 		0.708 0.708
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si007683m MADS box 28 75

Links

Other MADS box family TFs
Other Setaria italica TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb07g026180 Sorghum bicolor Sb07g026180 I 0.917
BGIOSGA029053 Oryza indica BGIOSGA029053 I 0.896
LPERR08G18330 Leersia perrieri LPERR08G18330 I 0.896
OBART08G21560 Oryza barthii OBART08G21560 I 0.896
OGLUM08G22840 Oryza glumaepatula OGLUM08G22840 I 0.896
OMERI06G13650 Oryza meridionalis OMERI06G13650 I 0.896
ONIVA08G24570 Oryza nivara ONIVA08G24570 I 0.896
ORGLA08G0229900 Oryza glaberrima ORGLA08G0229900 I 0.896
ORUFI08G24040 Oryza rufipogon ORUFI08G24040 I 0.896
OS08G0531900 Oryza sativa OS08G0531900 I 0.896
Si014540m.g Setaria italica Si014540m.g I 0.896
Pavir.J26790 Panicum virgatum Pavir.J26790 I 0.896
F775_00385 Aegilops tauschii F775_00385 I 0.875
F775_23758 Aegilops tauschii F775_23758 I 0.875
Si008672m.g Setaria italica Si008672m.g I 0.875
Si015525m.g Setaria italica Si015525m.g I 0.875
Traes_7DS_4DF7EB08F Triticum aestivum Traes_7DS_4DF7EB08F I 0.875
Traes_7AS_F568FCBF1 Triticum aestivum Traes_7AS_F568FCBF1 I 0.870
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.860
MLOC_76418 Hordeum vulgare MLOC_76418 I 0.854
OB08G28340 Oryza brachyantha OB08G28340 I 0.854
OPUNC08G18260 Oryza punctata OPUNC08G18260 I 0.854
OPUNC08G19670 Oryza punctata OPUNC08G19670 I 0.854
BRADI3G41297 Brachypodium distachyon BRADI3G41297 I 0.833
MLOC_12290 Hordeum vulgare MLOC_12290 I 0.833
Pavir.Fa00163 Panicum virgatum Pavir.Fa00163 I 0.833
GRMZM2G098986 Zea mays GRMZM2G098986 I 0.812
GSMUA_Achr11G15560_001 Musa acuminata GSMUA_Achr11G15560_001 I 0.812
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.800
BRADI2G59187 Brachypodium distachyon BRADI2G59187 I 0.792
F775_43625 Aegilops tauschii F775_43625 I 0.792
GSMUA_Achr8G09250_001 Musa acuminata GSMUA_Achr8G09250_001 I 0.792
GSMUA_AchrUn_randomG20290_001 Musa acuminata GSMUA_AchrUn_randomG20290_001 I 0.792
Sb04g000500 Sorghum bicolor Sb04g000500 I 0.792
Si019985m.g Setaria italica Si019985m.g I 0.792
TRAES3BF009000040CFD_g Triticum aestivum TRAES3BF009000040CFD_g I 0.792
TRIUR3_19056 Triticum urartu TRIUR3_19056 I 0.792
BGIOSGA007333 Oryza indica BGIOSGA007333 I 0.771
BGIOSGA007336 Oryza indica BGIOSGA007336 I 0.771
BRADI2G59120 Brachypodium distachyon BRADI2G59120 I 0.771
GRMZM2G320549 Zea mays GRMZM2G320549 I 0.771
LPERR02G00370 Leersia perrieri LPERR02G00370 I 0.771
OBART02G00360 Oryza barthii OBART02G00360 I 0.771
OGLUM02G00350 Oryza glumaepatula OGLUM02G00350 I 0.771
OLONG_001786 Oryza longistaminata OLONG_001786 I 0.771
OMERI02G09250 Oryza meridionalis OMERI02G09250 I 0.771
ONIVA02G00370 Oryza nivara ONIVA02G00370 I 0.771
OPUNC02G00040 Oryza punctata OPUNC02G00040 I 0.771
ORGLA02G0003200 Oryza glaberrima ORGLA02G0003200 I 0.771
ORUFI02G00390 Oryza rufipogon ORUFI02G00390 I 0.771
OS02G0104100 Oryza sativa OS02G0104100 I 0.771
Sb03g006210 Sorghum bicolor Sb03g006210 I 0.771
TRAES3BF009000010CFD_g Triticum aestivum TRAES3BF009000010CFD_g I 0.771
TRIUR3_28473 Triticum urartu TRIUR3_28473 I 0.771
TRIUR3_30872 Triticum urartu TRIUR3_30872 I 0.771
BRADI3G32090 Brachypodium distachyon BRADI3G32090 I 0.750
F775_08627 Aegilops tauschii F775_08627 I 0.750
F775_29801 Aegilops tauschii F775_29801 I 0.750
Traes_1AL_6B108514B Triticum aestivum Traes_1AL_6B108514B I 0.750
Traes_1BL_F1D5BF5F8 Triticum aestivum Traes_1BL_F1D5BF5F8 I 0.750
Traes_4BL_B8FFB0854 Triticum aestivum Traes_4BL_B8FFB0854 I 0.750
Traes_4DL_5633C0561 Triticum aestivum Traes_4DL_5633C0561 I 0.750
TRIUR3_20985 Triticum urartu TRIUR3_20985 I 0.750
TRIUR3_30073 Triticum urartu TRIUR3_30073 I 0.750
TRIUR3_32699 Triticum urartu TRIUR3_32699 I 0.750
Pavir.Ab00058 Panicum virgatum Pavir.Ab00058 I 0.750
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.729
AMTR_s00001p00266470 Amborella trichopoda AMTR_s00001p00266470 I 0.729
AGL71 Arabidopsis thaliana AT5G51870 I 0.729
MADS56 Oryza indica BGIOSGA033356 I 0.729
Bo1g040180 Brassica oleracea Bo1g040180 I 0.729
Bo8g050720 Brassica oleracea Bo8g050720 I 0.729
Bra013891 Brassica rapa Bra013891 I 0.729
Bra028283 Brassica rapa Bra028283 I 0.729
F775_25597 Aegilops tauschii F775_25597 I 0.729
GLYMA10G38541 Glycine max GLYMA10G38541 I 0.729
GLYMA20G29300 Glycine max GLYMA20G29300 I 0.729
GRMZM2G171365 Zea mays GRMZM2G171365 I 0.729
LPERR03G01640 Leersia perrieri LPERR03G01640 I 0.729
LPERR06G00470 Leersia perrieri LPERR06G00470 I 0.729
LPERR08G12860 Leersia perrieri LPERR08G12860 I 0.729
LPERR10G12950 Leersia perrieri LPERR10G12950 I 0.729
MTR_8g033220 Medicago truncatula MTR_8g033220 I 0.729
OB06G10570 Oryza brachyantha OB06G10570 I 0.729
OB10G24040 Oryza brachyantha OB10G24040 I 0.729
OBART10G16960 Oryza barthii OBART10G16960 I 0.729
OGLUM10G16960 Oryza glumaepatula OGLUM10G16960 I 0.729
OLONG_017665 Oryza longistaminata OLONG_017665 I 0.729
OMERI10G13430 Oryza meridionalis OMERI10G13430 I 0.729
ONIVA10G18680 Oryza nivara ONIVA10G18680 I 0.729
OPUNC06G00450 Oryza punctata OPUNC06G00450 I 0.729
ORGLA10G0119200 Oryza glaberrima ORGLA10G0119200 I 0.729
ORUFI10G17990 Oryza rufipogon ORUFI10G17990 I 0.729
MADS56 Oryza sativa OS10G0536100 I 0.729
PGSC0003DMG400022748 Solanum tuberosum PGSC0003DMG400022748 I 0.729
Sb01g049020 Sorghum bicolor Sb01g049020 I 0.729
Si004582m.g Setaria italica Si004582m.g I 0.729
Si005133m.g Setaria italica Si005133m.g I 0.729
Si038257m.g Setaria italica Si038257m.g I 0.729
Solyc08g080100.2 Solanum lycopersicum Solyc08g080100.2 I 0.729
Traes_6AS_D6ABA1D79 Triticum aestivum Traes_6AS_D6ABA1D79 I 0.729
Traes_6DS_2BAD7A60A Triticum aestivum Traes_6DS_2BAD7A60A I 0.729
TRIUR3_18962 Triticum urartu TRIUR3_18962 I 0.729
Aquca_013_00471 Aquilegia coerulea Aquca_013_00471 I 0.729
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.729
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.729
Pavir.Aa03568 Panicum virgatum Pavir.Aa03568 I 0.729
Pavir.J02739 Panicum virgatum Pavir.J02739 I 0.729
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.729
Traes_5BS_A19FD8E34 Triticum aestivum Traes_5BS_A19FD8E34 I 0.727
Pavir.J08622 Panicum virgatum Pavir.J08622 I 0.723
AGL72 Arabidopsis thaliana AT5G51860 I 0.708
BGIOSGA005076 Oryza indica BGIOSGA005076 I 0.708
BGIOSGA018621 Oryza indica BGIOSGA018621 I 0.708
BGIOSGA022154 Oryza indica BGIOSGA022154 I 0.708
Bo2g162920 Brassica oleracea Bo2g162920 I 0.708
Bo3g023570 Brassica oleracea Bo3g023570 I 0.708
Bo4g108190 Brassica oleracea Bo4g108190 I 0.708
Bo7g110310 Brassica oleracea Bo7g110310 I 0.708
Bo9g093920 Brassica oleracea Bo9g093920 I 0.708
Bra010465 Brassica rapa Bra010465 I 0.708
Bra014552 Brassica rapa Bra014552 I 0.708
Bra029154 Brassica rapa Bra029154 I 0.708
Bra029155 Brassica rapa Bra029155 I 0.708
Bra029281 Brassica rapa Bra029281 I 0.708
Bra029424 Brassica rapa Bra029424 I 0.708
Bra035907 Brassica rapa Bra035907 I 0.708
BRADI1G77020 Brachypodium distachyon BRADI1G77020 I 0.708
F775_10590 Aegilops tauschii F775_10590 I 0.708
GRMZM2G010669 Zea mays GRMZM2G010669 I 0.708
GRMZM2G026223 Zea mays GRMZM2G026223 I 0.708
GRMZM2G070034 Zea mays GRMZM2G070034 I 0.708
GSMUA_Achr1G24070_001 Musa acuminata GSMUA_Achr1G24070_001 I 0.708
GSMUA_Achr6G14760_001 Musa acuminata GSMUA_Achr6G14760_001 I 0.708
LPERR01G36730 Leersia perrieri LPERR01G36730 I 0.708
OB03G11760 Oryza brachyantha OB03G11760 I 0.708
OBART01G42170 Oryza barthii OBART01G42170 I 0.708
OBART03G01800 Oryza barthii OBART03G01800 I 0.708
OBART06G00520 Oryza barthii OBART06G00520 I 0.708
OGLUM01G46440 Oryza glumaepatula OGLUM01G46440 I 0.708
OGLUM03G01750 Oryza glumaepatula OGLUM03G01750 I 0.708
OGLUM06G00450 Oryza glumaepatula OGLUM06G00450 I 0.708
OLONG_004735 Oryza longistaminata OLONG_004735 I 0.708
OLONG_010918 Oryza longistaminata OLONG_010918 I 0.708
OMERI01G39210 Oryza meridionalis OMERI01G39210 I 0.708
OMERI03G01730 Oryza meridionalis OMERI03G01730 I 0.708
OMERI06G00470 Oryza meridionalis OMERI06G00470 I 0.708
ONIVA01G48250 Oryza nivara ONIVA01G48250 I 0.708
ONIVA03G01420 Oryza nivara ONIVA03G01420 I 0.708
ONIVA06G00530 Oryza nivara ONIVA06G00530 I 0.708
OPUNC01G41110 Oryza punctata OPUNC01G41110 I 0.708
OPUNC03G01630 Oryza punctata OPUNC03G01630 I 0.708
OPUNC08G17110 Oryza punctata OPUNC08G17110 I 0.708
OPUNC10G15300 Oryza punctata OPUNC10G15300 I 0.708
ORGLA01G0361900 Oryza glaberrima ORGLA01G0361900 I 0.708
ORGLA03G0015400 Oryza glaberrima ORGLA03G0015400 I 0.708
ORGLA06G0005200 Oryza glaberrima ORGLA06G0005200 I 0.708
ORUFI03G01510 Oryza rufipogon ORUFI03G01510 I 0.708
ORUFI05G07100 Oryza rufipogon ORUFI05G07100 I 0.708
ORUFI06G00550 Oryza rufipogon ORUFI06G00550 I 0.708
MADS50 Oryza sativa OS03G0122600 D 0.708
OS05G0203800 Oryza sativa OS05G0203800 I 0.708
OS06G0108500 Oryza sativa OS06G0108500 I 0.708
PGSC0003DMG400025279 Solanum tuberosum PGSC0003DMG400025279 I 0.708
POPTR_0014s07020 Populus trichocarpa POPTR_0014s07020 I 0.708
PRUPE_ppa014428mg Prunus persica PRUPE_ppa014428mg I 0.708
Sb01g030570 Sorghum bicolor Sb01g030570 I 0.708
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.708
Solyc06g035570.1 Solanum lycopersicum Solyc06g035570.1 I 0.708
Traes_1AL_6F5982F88 Triticum aestivum Traes_1AL_6F5982F88 I 0.708
Traes_1DL_D5BBCA2D0 Triticum aestivum Traes_1DL_D5BBCA2D0 I 0.708
TRIUR3_22964 Triticum urartu TRIUR3_22964 I 0.708
VIT_15s0048g01240 Vitis vinifera VIT_15s0048g01240 I 0.708
Ca_16423 Cicer arietinum Ca_16423 I 0.708
Pm018089 Prunus mume Pm018089 I 0.708
Q9ATE7_PETHY Petunia x hybrida Q9ATE7_PETHY D 0.708
Cucsa.392160 Cucumis sativus Cucsa.392160 I 0.708
mgf005831m Mimulus guttatus mgf005831m I 0.708
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.708
Cagra.2248s0020 Capsella grandiflora Cagra.2248s0020 I 0.708
evm.TU.supercontig_18.166 Carica papaya evm.TU.supercontig_18.166 I 0.708
gene13354-v1.0-hybrid Fragaria vesca gene13354-v1.0-hybrid I 0.708
Lus10036543.g Linum usitatissimum Lus10036543.g I 0.708
Pavir.Ia04538 Panicum virgatum Pavir.Ia04538 I 0.708
Pavir.Ib00012 Panicum virgatum Pavir.Ib00012 I 0.708
SapurV1A.0578s0130 Salix purpurea SapurV1A.0578s0130 I 0.708
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.708
Thhalv10026205m.g Eutrema salsugineum Thhalv10026205m.g I 0.708
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.707
Pavir.Eb00729 Panicum virgatum Pavir.Eb00729 I 0.706