CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si023118m.g
(
Setaria italica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Si023118m.g
T256236_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si023118m
MADS box
21
68
YIEDPARRMVTFSKRKSGLLKKASELSLLCGARVAAIVFSQAGKPFAF
Links
Other
MADS box
family TFs
Other
Setaria italica
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb09g016220
Sorghum bicolor
Sb09g016220
N
0.830
Pavir.Ca01978
Panicum virgatum
Pavir.Ca01978
N
0.750
Pavir.Cb01477
Panicum virgatum
Pavir.Cb01477
N
0.750
Traes_7DL_A773A64E2
Triticum aestivum
Traes_7DL_A773A64E2
N
0.732
Pavir.J16245
Panicum virgatum
Pavir.J16245
N
0.729
LPERR01G04800
Leersia perrieri
LPERR01G04800
N
0.708
Pavir.J29996
Panicum virgatum
Pavir.J29996
N
0.708
H311_00382
Anncaliia algerae
H311_00382
I
0.704