CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG012073.1
(
Alligator sinensis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Alligator_sinensis_CCG012073.1
T256874_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG012073.1
MADS box
114
137
FIDNKLRRYTTFSKRKTGIMKKAG
Alligator_sinensis_CCG012073.1
MADS box
181
207
PAYELSTLTGTQVLLLVASETGHVYTF
Links
Other
MADS box
family TFs
Other
Alligator sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHACADRAFT_102406
Phanerochaete carnosa
PHACADRAFT_102406
N
0.707