CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm007730
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm007730
T257045_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm007730
MADS box
10
58
WITNDSARKTSFRKRKEGLLKKLSELSILCDVSGFAIIYGPDDKEPVVW
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa022382mg
Prunus persica
PRUPE_ppa022382mg
N
1.000
evm.TU.contig_43368
Carica papaya
evm.TU.contig_43368
I
0.727
LjSGA_147985.1
Lotus japonicus
LjSGA_147985.1
I
0.704