CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.scaffold_198000080
(
Physcomitrella patens
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
fgenesh1_pg.scaffold_198000080
T257352_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_198000080
MADS box
13
53
AKKIQTTYSKRKVGLINKAKELGILCGNQVVMIAFNPSGSD
Links
Other
MADS box
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.scaffold_198000079
Physcomitrella patens
fgenesh1_pg.scaffold_198000079
N
0.744