CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.27991s0056
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.27991s0056
T257624_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.27991s0056.1.p
MADS box
11
53
VENDKARAISLKRRIEGLLKKVKELTILCNIRACIIIFSPNEV
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.4044s0006
Capsella grandiflora
Cagra.4044s0006
N
0.837
Carubv10024813m.g
Capsella rubella
Carubv10024813m.g
N
0.837
Bostr.19424s0082
Boechera stricta
Bostr.19424s0082
N
0.744
Carubv10006793m.g
Capsella rubella
Carubv10006793m.g
N
0.721