CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000664841
(
Malus domestica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MDP0000664841
T258767_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000664841
MADS box
12
60
LIPNESSRKVTFRKRRNGLLKKAGDLKTLCDVKVCTIVYEKKSKGKLST
Links
Other
MADS box
family TFs
Other
Malus domestica
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.009G358500
Gossypium raimondii
Gorai.009G358500
I
0.789
PRUPE_ppa020857mg
Prunus persica
PRUPE_ppa020857mg
N
0.739
Pm016160
Prunus mume
Pm016160
N
0.717