Pavir.Ea02667 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.Ea02667 T258894_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea02667.1.p MADS box 10 57

Links

Other MADS box family TFs
Other Panicum virgatum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G001139 Zea mays GRMZM2G001139 N 1.000
Sb03g033380 Sorghum bicolor Sb03g033380 N 1.000
Si002988m.g Setaria italica Si002988m.g N 1.000
Pavir.Eb02653 Panicum virgatum Pavir.Eb02653 N 1.000
GRMZM2G079727 Zea mays GRMZM2G079727 N 0.958
BRADI2G48690 Brachypodium distachyon BRADI2G48690 N 0.938
BGIOSGA000892 Oryza indica BGIOSGA000892 N 0.917
GSMUA_Achr9G05780_001 Musa acuminata GSMUA_Achr9G05780_001 N 0.917
LPERR01G25340 Leersia perrieri LPERR01G25340 N 0.917
OB01G38450 Oryza brachyantha OB01G38450 N 0.917
OBART01G29490 Oryza barthii OBART01G29490 N 0.917
OGLUM01G33550 Oryza glumaepatula OGLUM01G33550 N 0.917
ONIVA01G33710 Oryza nivara ONIVA01G33710 N 0.917
OPUNC01G29290 Oryza punctata OPUNC01G29290 N 0.917
ORGLA01G0242900 Oryza glaberrima ORGLA01G0242900 N 0.917
ORUFI01G32600 Oryza rufipogon ORUFI01G32600 N 0.917
MADS32 Oryza sativa OS01G0726400 N 0.917
F775_28377 Aegilops tauschii F775_28377 N 0.896
MLOC_80902 Hordeum vulgare MLOC_80902 N 0.896
Traes_3AL_219064574 Triticum aestivum Traes_3AL_219064574 N 0.896
TRAES3BF048900050CFD_g Triticum aestivum TRAES3BF048900050CFD_g N 0.896
PDK_20s13009472g001 Phoenix dactylifera PDK_20s13009472g001 N 0.896
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.733
estExt_fgenesh1_kg.C_550007 Physcomitrella patens estExt_fgenesh1_kg.C_550007 I 0.708
PK10594.1 Cannabis sativa PK10594.1 I 0.708
ONIVA04G11980 Oryza nivara ONIVA04G11980 I 0.700