Thhalv10002204m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10002204m.g T259094_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL33
M10911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT2G26320_01 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002204m MADS box 16 63

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g098790 Brassica oleracea Bo8g098790 I 0.875
Bo8g098770 Brassica oleracea Bo8g098770 N 0.833
AGL33 Arabidopsis thaliana AT2G26320 D 0.771
Bostr.26326s0009 Boechera stricta Bostr.26326s0009 I 0.771
Al_scaffold_0007_3101 Arabidopsis lyrata Al_scaffold_0007_3101 I 0.750
fgenesh1_pm.C_scaffold_4000481 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4000481 I 0.750