CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10004893m.g
(
Eutrema salsugineum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Thhalv10004893m.g
T259112_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004893m
MADS box
10
53
YIENESSRKSTYKKRKSGILKKAYELATLCDVPIAVMIDSPYDL
Links
Other
MADS box
family TFs
Other
Eutrema salsugineum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g155770
Brassica oleracea
Bo2g155770
N
0.818
Bra020555
Brassica rapa
Bra020555
N
0.818
Carubv10003757m.g
Capsella rubella
Carubv10003757m.g
N
0.750
Carubv10008056m.g
Capsella rubella
Carubv10008056m.g
N
0.727