CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10019667m.g
(
Eutrema salsugineum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Thhalv10019667m.g
T259156_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10019667m
MADS box
9
53
FIENNSSRKAPFQKRKKGLLKKVKELSTLYGVTACVILYSPNTSN
Links
Other
MADS box
family TFs
Other
Eutrema salsugineum
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10002956m.g
Eutrema salsugineum
Thhalv10002956m.g
I
0.844
Thhalv10002996m.g
Eutrema salsugineum
Thhalv10002996m.g
I
0.844
Thhalv10002789m.g
Eutrema salsugineum
Thhalv10002789m.g
I
0.826
Thhalv10002352m.g
Eutrema salsugineum
Thhalv10002352m.g
I
0.795
Thhalv10002350m.g
Eutrema salsugineum
Thhalv10002350m.g
I
0.778
Thhalv10002353m.g
Eutrema salsugineum
Thhalv10002353m.g
I
0.773
Thhalv10019516m.g
Eutrema salsugineum
Thhalv10019516m.g
I
0.766
Thhalv10002346m.g
Eutrema salsugineum
Thhalv10002346m.g
I
0.745
Thhalv10019451m.g
Eutrema salsugineum
Thhalv10019451m.g
I
0.745
Thhalv10019579m.g
Eutrema salsugineum
Thhalv10019579m.g
I
0.745
Thhalv10019751m.g
Eutrema salsugineum
Thhalv10019751m.g
I
0.745
Thhalv10002349m.g
Eutrema salsugineum
Thhalv10002349m.g
I
0.733
Thhalv10012000m.g
Eutrema salsugineum
Thhalv10012000m.g
I
0.733
Thhalv10019681m.g
Eutrema salsugineum
Thhalv10019681m.g
I
0.733
Thhalv10019731m.g
Eutrema salsugineum
Thhalv10019731m.g
I
0.733
Thhalv10019833m.g
Eutrema salsugineum
Thhalv10019833m.g
I
0.733
Thhalv10019449m.g
Eutrema salsugineum
Thhalv10019449m.g
I
0.702
Thhalv10019810m.g
Eutrema salsugineum
Thhalv10019810m.g
I
0.702