SKUD_178104 (Saccharomyces kudriavzevii)
MATalpha_HMGbox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04769 (MATalpha_HMGbox) IPR006856 SKUD_178104 T259781_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MATALPHA1
M08591_2.00 		Saccharomyces cerevisiae
NTTCNTNATTNGNNNNNCAATN
NATTGNNNNNCNAATNANGAAN		 Misc
DeBoer et al.(2011)
YCR040W_1418 		0.870 0.870
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42567 MATalpha_HMGbox 46 149

Links

Other MATalpha_HMGbox family TFs
Other Saccharomyces kudriavzevii TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1910_Multiple Saccharomyces mikatae 1910_Multiple I 0.911
2577_Multiple Saccharomyces paradoxus 2577_Multiple I 0.911
HMLALPHA1 Saccharomyces cerevisiae YCL066W I 0.870
MATALPHA1 Saccharomyces cerevisiae YCR040W D 0.870
2262_Multiple Saccharomyces mikatae 2262_Multiple I 0.864
2770_Multiple Saccharomyces bayanus 2770_Multiple I 0.761