CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gw1.2.972.1
(
Nectria haematococca
)
MATalpha_HMGbox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04769 (MATalpha_HMGbox)
IPR006856
gw1.2.972.1
T259813_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.2.972.1
MATalpha_HMGbox
1
161
VGRTKRPLNAFMAFRTYYLKMFPDVQQKTVSGFLTTLWNKEAQRNKWALIAKVYSFVRDHLGKAKVNLAAFLALCCPIMRMIDPADYLDTLGWVVQENTEGAMTITQVQDDEHSVESTSSPDAYPTSEIELLASLVESGYLPEYGPALVQLMSQNNNGMMT
Links
Other
MATalpha_HMGbox
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG17696
Fusarium solani
NechaG17696
N
1.000