CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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matA-1
(
Neurospora crassa
)
MATalpha_HMGbox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04769 (MATalpha_HMGbox)
IPR006856
NCU01958
T259814_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU01958.1
MATalpha_HMGbox
7
194
IVKTFADLAEDDREAAMRAFSRMMRRGTEPVRRIPAAKKKVNGFMGFRSYYSPLFSQLPQKERSPFMTILWQHDPFHNEWDFMCSVYSSIRTYLEQEKVTLQLWIHYAVGHLGVIIRDNYMASFGWNLVRFPNGTHDLERTALPLVQHNLQPMNGLCLLTKCLESGLPLANPHSVIAKLSDPSYDMIW
NCU01958.2
MATalpha_HMGbox
7
194
IVKTFADLAEDDREAAMRAFSRMMRRGTEPVRRIPAAKKKVNGFMGFRSYYSPLFSQLPQKERSPFMTILWQHDPFHNEWDFMCSVYSSIRTYLEQEKVTLQLWIHYAVGHLGVIIRDNYMASFGWNLVRFPNGTHDLERTALPLVQHNLQPMNGLCLLTKCLESGLPLANPHSVIAKLSDPSYDMIW
Links
Other
MATalpha_HMGbox
family TFs
Other
Neurospora crassa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_89543
Neurospora tetrasperma
NEUTE1DRAFT_89543
N
0.989
estExt_Genewise1Plus.C_20877
Neurospora discreta
estExt_Genewise1Plus.C_20877
N
0.962
SMAC_05401
Sordaria macrospora
SMAC_05401
N
0.723