CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g020780
(
Brassica oleracea
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
Bo5g020780
T259934_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g020780.1
MBD
169
265
TDELVSIELPAPTSWKKLFYPKRAGTPRKTEIVFMAPTGEEISSRKQLEQYLKAHPGNPLVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNQVAQ
Links
Other
MBD
family TFs
Other
Brassica oleracea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo8g066360
Brassica oleracea
Bo8g066360
N
0.750
Bra016665
Brassica rapa
Bra016665
N
0.750
Thhalv10007967m.g
Eutrema salsugineum
Thhalv10007967m.g
N
0.750
MBD10
Arabidopsis thaliana
AT1G15340
N
0.737
MBD10
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001305
N
0.737
Bostr.7128s0147
Boechera stricta
Bostr.7128s0147
N
0.716