CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra002530
(
Brassica rapa
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
Bra002530
T259945_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra002530.1-P
MBD
31
103
DPTSSSRKLLPGWTIVKRPRSSSTSRKGSVDTYFVEPGTGREFPSLESVQRHLVGEVHDRRLTLTGHFSNERT
Bra002530.1-P
MBD
118
182
SEYASKGFRLPKGWIVEEFPRLNSYHIDKFYVERKTGYRFRSLVSVERYLKDPGKRADKQPMLIE
Bra002530.1-P
MBD
183
268
HHRPRSKGFSLPDGWIVEGKPRSNSSQIDKTYIEPGTGNRFRSLAAVERYLNGTDDSVNSMVPSGRLSAGFQTVVVDENPPEKVKW
Links
Other
MBD
family TFs
Other
Brassica rapa
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g140790
Brassica oleracea
Bo9g140790
N
0.935