CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra026773
(
Brassica rapa
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
Bra026773
T259955_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra026773.1-P
MBD
6
77
EMVFIELPAPSSWTKLYYPELAGSPRKTKIVFVAPTGERISSRKQLEKYLKAHPGSPVISEFDWTNGESPRR
Links
Other
MBD
family TFs
Other
Brassica rapa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo8g106130
Brassica oleracea
Bo8g106130
N
0.931
MBD10
Arabidopsis thaliana
AT1G15340
N
0.792
Bo8g066360
Brassica oleracea
Bo8g066360
N
0.792
Bra016665
Brassica rapa
Bra016665
N
0.792
MBD10
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001305
N
0.778
Cagra.2238s0088
Capsella grandiflora
Cagra.2238s0088
N
0.764
Carubv10009517m.g
Capsella rubella
Carubv10009517m.g
N
0.764
Thhalv10007967m.g
Eutrema salsugineum
Thhalv10007967m.g
N
0.764
Bostr.7128s0147
Boechera stricta
Bostr.7128s0147
N
0.750