CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g089750
(
Medicago truncatula
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
MTR_1g089750
T260688_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES61863
MBD
79
152
WVIDKPNIPKTPQGFKKILVLRKDYSKLDSYYITPTGKKLRTRNEIAAYLKDHPQPSGVSAADFDFSSPKIMQD
KEH43284
MBD
64
137
WVIDKPNIPKTPQGFKKILVLRKDYSKLDSYYITPTGKKLRTRNEIAAYLKDHPQPSGVSAADFDFSSPKIMQD
Links
Other
MBD
family TFs
Other
Medicago truncatula
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_08314
Cicer arietinum
Ca_08314
N
0.878
GLYMA02G16930
Glycine max
GLYMA02G16930
N
0.851
GLYMA10G02860
Glycine max
GLYMA10G02860
N
0.851
MTR_0019s0330
Medicago truncatula
MTR_0019s0330
N
0.824
LjSGA_013286.1
Lotus japonicus
LjSGA_013286.1
N
0.824
MTR_6g055750
Medicago truncatula
MTR_6g055750
N
0.819
MTR_0019s0270
Medicago truncatula
MTR_0019s0270
N
0.811
chr5.CM0909.10.nc
Lotus japonicus
chr5.CM0909.10.nc
N
0.797
MTR_0019s0310
Medicago truncatula
MTR_0019s0310
N
0.784
MTR_6g027250
Medicago truncatula
MTR_6g027250
N
0.770
MTR_6g027240
Medicago truncatula
MTR_6g027240
N
0.743
Pm019897
Prunus mume
Pm019897
N
0.716