CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_021830
(
Oryza longistaminata
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
OLONG_021830
T260771_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_021830-R1
MBD
35
114
LEEEEERPGWLPDGWIMEVYQGDDGTIYRYYTSPISGLTFTMKSEVLQYLFSGMDERFLESKNCAADNQLINNSVYVSPT
OLONG_021830-R1
MBD
115
182
MTYMQMTHEWLPKGWIIEVRAGGKNMNKMYKFYVYPPAGVRLFSKEDVLLYINKSEITGFDTNGECDT
OLONG_021830-R1
MBD
192
290
VEFNPHSLPEGWVKEVVFRKTKTGVIRKDPYFTDPVNNYSFRTRKSAMLYVQTGKVPKRAFIQRTSVHDLYSFEKSADLHESLKKRLDFAARTNRKSRR
Links
Other
MBD
family TFs
Other
Oryza longistaminata
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA015448
Oryza indica
BGIOSGA015448
N
1.000
OS04G0273900
Oryza sativa
OS04G0273900
N
0.951
OBART04G05900
Oryza barthii
OBART04G05900
N
0.917
OMERI04G05440
Oryza meridionalis
OMERI04G05440
N
0.917
ONIVA04G04250
Oryza nivara
ONIVA04G04250
N
0.917
ORUFI04G06850
Oryza rufipogon
ORUFI04G06850
N
0.913
OB04G14690
Oryza brachyantha
OB04G14690
N
0.714