Alligator_sinensis_CCG000430.1 (Alligator sinensis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Alligator_sinensis_CCG000430.1 T261221_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG000430.1 MBD 12 52
Alligator_sinensis_CCG000430.1 MBD 53 126

Links

Other MBD family TFs
Other Alligator sinensis TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011698 Calypte anna Aan_R011698 N 0.967
Gfo_R007597 Geospiza fortis Gfo_R007597 N 0.967
ENSSHAG00000013346 Sarcophilus harrisii ENSSHAG00000013346 N 0.948
ENSAPLG00000003384 Anas platyrhynchos ENSAPLG00000003384 N 0.948
MBD3 Meleagris gallopavo ENSMGAG00000002493 N 0.938
MBD3 Monodelphis domestica ENSMODG00000004125 N 0.928
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.910
Brh_R003386 Buceros rhinoceros Brh_R003386 N 0.907
Tal_R008196 Tyto alba Tal_R008196 N 0.907
Afo_R010057 Aptenodytes forsteri Afo_R010057 N 0.907
MBD3 Ornithorhynchus anatinus ENSOANG00000003672 N 0.863
ENSPPYG00000009325 Pongo abelii ENSPPYG00000009325 I 0.860
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.835
ENSXMAG00000012716 Xiphophorus maculatus ENSXMAG00000012716 I 0.833
ENSLOCG00000006043 Lepisosteus oculatus ENSLOCG00000006043 N 0.825
ENSMPUG00000008045 Mustela putorius furo ENSMPUG00000008045 N 0.809
Myotis_brandtii_MBD3_10015627 Myotis brandtii Myotis_brandtii_MBD3_10015627 N 0.780
MBD3 Canis familiaris ENSCAFG00000019503 N 0.773
ENSPANG00000015324 Papio anubis ENSPANG00000015324 N 0.763
Mbd3 Mus musculus ENSMUSG00000035478 N 0.763
MBD3 Homo sapiens ENSG00000071655 N 0.763
ENSP00000156825 Macaca fascicularis ENSP00000156825 N 0.763
Mbd3 Rattus norvegicus ENSRNOG00000028956 N 0.753
ENSOARG00000012359 Ovis aries ENSOARG00000012359 I 0.742
mbd3.S Xenopus laevis XB-GENE-491557 I 0.742
MBD3 Equus caballus ENSECAG00000015485 I 0.742
ENSMEUG00000003078 Macropus eugenii ENSMEUG00000003078 N 0.732
MBD3 Felis catus ENSFCAG00000000763 I 0.732
MBD3 Ochotona princeps ENSOPRG00000008719 I 0.732
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.732
ENSAMXG00000017952 Astyanax mexicanus ENSAMXG00000017952 I 0.722
mbd3b Danio rerio ENSDARG00000042029 I 0.722
MBD3 Pteropus vampyrus ENSPVAG00000017085 I 0.722
MBD3 Taeniopygia guttata ENSTGUG00000000202 N 0.720
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.711
mbd3a Danio rerio ENSDARG00000061774 I 0.701