CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R005714
(
Geospiza fortis
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Gfo_R005714
T261276_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R005714
MBD
154
227
YRGENPLKIPILFDFQRRHAKADCLSKPLDVNYKAPCGRSLRSFRDVRNYLFETECNFLFVDHFSFNTYVLLGR
Links
Other
MBD
family TFs
Other
Geospiza fortis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSFALG00000008379
Ficedula albicollis
ENSFALG00000008379
N
0.973
ENSTGUG00000012159
Taeniopygia guttata
ENSTGUG00000012159
N
0.959
Afo_R002243
Aptenodytes forsteri
Afo_R002243
N
0.932
Aan_R006408
Calypte anna
Aan_R006408
N
0.919
Tal_R012708
Tyto alba
Tal_R012708
N
0.919
ENSAPLG00000009061
Anas platyrhynchos
ENSAPLG00000009061
N
0.892
Brh_R002639
Buceros rhinoceros
Brh_R002639
N
0.878
SETDB2
Gallus gallus
ENSGALG00000017006
N
0.875
SETDB2
Meleagris gallopavo
ENSMGAG00000015017
N
0.865
ENSPSIG00000002200
Pelodiscus sinensis
ENSPSIG00000002200
N
0.784