CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.5588s0010
(
Capsella grandiflora
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Cagra.5588s0010
T261453_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.5588s0010.1.p
MBD
9
34
VSGELSMVIYGEPAGKAISGEPSKVS
Cagra.5588s0010.1.p
MBD
111
167
DHTCPRYKWLHPGWICEERVKPSHRLYRYFYDPLGQMYNTKGEVAQMYADTEKTRAL
Links
Other
MBD
family TFs
Other
Capsella grandiflora
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10003785m.g
Capsella rubella
Carubv10003785m.g
N
0.953