Carubv10026965m.g (Capsella rubella)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Carubv10026965m.g T261470_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10026965m MBD 109 218

Links

Other MBD family TFs
Other Capsella rubella TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.26484s0001 Capsella grandiflora Cagra.26484s0001 N 0.987
MBD6 Arabidopsis lyrata scaffold_802568.1 N 0.948
MBD6 Arabidopsis thaliana AT5G59380 N 0.935
Bostr.26833s0306 Boechera stricta Bostr.26833s0306 N 0.922
Bo3g018220 Brassica oleracea Bo3g018220 N 0.844
Bra006718 Brassica rapa Bra006718 N 0.831
Thhalv10014530m.g Eutrema salsugineum Thhalv10014530m.g N 0.818
Bo9g139330 Brassica oleracea Bo9g139330 N 0.805
Bra002571 Brassica rapa Bra002571 N 0.805
Bra020318 Brassica rapa Bra020318 N 0.740
Bo2g026750 Brassica oleracea Bo2g026750 N 0.727