CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g008463m.g
(
Citrus sinensis
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
orange1.1g008463m.g
T261579_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g008463m
MBD
3
33
DRENSDELLPDGCRVEVRVRKNGKKDKIIIE
orange1.1g008463m
MBD
33
96
EKDTPDGLPPGWTKEIKVTKTGRKVRRDPYYIDPASGYIFRSMKDAVRYVETGEIGRLAYKPKD
orange1.1g008894m
MBD
3
32
DRENSDELLPDGCRVEVRVRKNGKKDKIII
orange1.1g008894m
MBD
31
93
IIEKDTPDGLPPGWTKEIKVTKTGRKVRRDPYYIDPASGYIFRSMKDAVRYVETGEIGRLAYK
orange1.1g009314m
MBD
5
107
IEKDTPDGLPPGWTKEIKVTKTGRKVRRDPYYIDPASGYIFRSMKDAVRYVETGEIGRLAYKPKDDGNQDEEDLEDDKDNSPTATKKQKLEVTGTETDITSQS
Links
Other
MBD
family TFs
Other
Citrus sinensis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10004647m.g
Citrus clementina
Ciclev10004647m.g
N
0.905