CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Db00235
(
Panicum virgatum
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Pavir.Db00235
T261590_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Db00235.1.p
MBD
164
301
PNIAQPPPGWDREVRIRGASTKFADVYYTSPSGKRLRSLVEIGRYLAENPHYIREGVNLSQFSFAIPKPLQEDYVRKRTLTDAHELPELPEIAQVDPLFWAAPPIHRELLAGPGSSTSYPAYIKQPEMPDHVDLHQSE
Links
Other
MBD
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si006907m.g
Setaria italica
Si006907m.g
N
0.729
Pavir.J02869
Panicum virgatum
Pavir.J02869
N
0.725
Gorai.009G001500
Gossypium raimondii
Gorai.009G001500
N
0.700